Czech J. Food Sci., 2020, 38(3):151-157 | DOI: 10.17221/153/2019-CJFS
Discrimination of Thymus, Origanum, Satureja and Thymbra species from the family Labiatae by untargeted metabolomic analysisOriginal Paper
- 1 Department of Food Authenticity, Central Research Institute of Food and Feed Control, Ministry of Agriculture and Forestry, Bursa, Turkey
- 2 Department of Field Crops, Uludag University, Faculty of Agriculture, Bursa, Turkey
The term "thyme" does not refer to herbs that belong to a single species. The genera Thymus, Origanum, Satureja and Thymbra of the family Labiatae are traditionally named as thyme and locally known as 'kekik'. Unlike Turkey, these species are globally called differently. Spices made of Origanum, Thymus and Satureja are called oregano, thyme and savory, respectively. It is often difficult to differentiate them because of their similar smell and appearance. Most commercial products traded as a mixture of those genera and the mixing together of different species may lead to economically motivated adulteration and a product of reduced value. The species were analysed by LC-ESI-QTOF-MS and a comprehensive statistical workflow was designed. The data of methanolic extracts were assessed and an extraction algorithm was employed for the processing of raw data. Five species were discriminated using principal component analysis (PCA) and hierarchical cluster analysis (HCA). The results of PCA and HCA were consistent with each other. Twenty-one metabolites were determined for the discrimination.
Keywords: LC-QTOF; plant metabolomics; multivariate data analysis; thyme
Published: June 30, 2020 Show citation
| ACS | AIP | APA | ASA | Harvard | Chicago | Chicago Notes | IEEE | ISO690 | MLA | NLM | Turabian | Vancouver |
References
- Abu-Reidah I.M., Arráez-Román D., Al-Nuri M., Warad I., Segura-Carretero A. (2019): Untargeted metabolite profiling and phytochemical analysis of Micromeria fruticosa L. (Lamiaceae) leaves. Food Chemistry, 279: 128-143.
Go to original source...
Go to PubMed... - Awina T., Mediani A., Maulidiani, Leonga S.W., Faudzia S.M.M., Shaaria K., Abas F. (2019): Phytochemical and bioactivity alterations of Curcuma species harvested at different growth stages by NMR-based metabolomics. Journal of Food Composition and Analysis, 77: 66-76.
Go to original source... - Başer K.H.C., Arslan N. (2016): Oregano. In: Ambrose D.C.P., Manickavasagan A., Naik V. (eds): Leafy Medicinal Herbs: Botany, Chemistry, Postharvest Technology and Uses. CAB International, India: 170-188.
Go to original source... - Bedoya-Serna G.M., Dacanal G.C., Fernandes A.M., Pinho S.C. (2018): Antifungal activity of nanoemulsions encapsulating oregano (Origanum vulgare) essential oil: in vitro study and application in Minas Padrão cheese. Brazilian Journal of Microbiology, 49: 929-935.
Go to original source...
Go to PubMed... - Chishti S., Kaloo Z.A., Sultan P. (2013): Medicinal importance of genus Origanum: A review. Journal of Pharmacognosy and Phytochemistry, 5: 170-177.
- Davis P.H. (1982): Flora of Turkey and the East Aegean Islands. Edinburgh University Press, Edinburgh, UK; 7: 321.
- Davis P.H., Mill R.R., Tan K. (1988): Flora of Turkey and the East Aegean Islands. Edinburgh University Press: Edinburgh, UK: 10: 201-209.
- Deborde C., Moing A., Roch L., Jacob D., Rolin D., Giraudeau P. (2017): Plant metabolism as studied by NMR spectroscopy. Progress in Nuclear Magnetic Resonance Spectroscopy, 102-103: 61-97.
Go to original source...
Go to PubMed... - Defernez M., Wren E., Watson A.D., Gunning Y., Colquhoun I.J., Le Gall G., Kemsley E.K. (2017): Low-field 1H NMR spectroscopy for distinguishing between arabica and robusta ground roast coffees. Food Chemistry, 216: 106-113.
Go to original source...
Go to PubMed... - Farag M.A., Mohsen M. Heinke R., Wessjohann L.A. (2014): Metabolomic fingerprints of 21 date palm fruit varieties from Egypt using UPLC/PDA/ESI-qTOF-MS and GC-MS analysed by chemometrics. Food Research International, 64: 218-226.
Go to original source...
Go to PubMed... - Gad H.A., El-Ahmady S.H., Abou-Shoer M.I., Al-Azizi M.M. (2013): A modern approach to the authentication and quality assessment of thyme using UV spectroscopy and chemometric analysis. Phytochemical Analysis, 24: 520-526.
Go to original source...
Go to PubMed... - Kirkwood, J.S., Maier C., Stevens J.F. (2013): Simultaneous, untargeted metabolic profiling of polar and nonpolar metabolites by LC-Q-TOF mass spectrometry. Current Protocols in Toxicology, 4: 4-39.
Go to original source...
Go to PubMed... - Koparal A.T., Zeytinoğlu M. (2003): Effects of carvacrol on a human non-small cell lung cancer (NSCLC) cell line, A549. Cytotechnology, 43: 149-154.
Go to original source...
Go to PubMed... - Liu Y., Li L., Xiao Y.Q., Yao J.Q., Li P.Y., Yu D.R., Ma Y.L. (2016): Global metabolite profiling and diagnostic ion filtering strategy by LC-QTOF MS for rapid identification of raw and processed pieces of Rheum palmatum L. Food Chemistry, 192: 531-540.
Go to original source...
Go to PubMed... - Marieschi M., Torelli A., Poli F., Sacchetti G., Bruni R. (2009): RAPD-Based method for the quality control of Mediterranean oregano and its contribution to pharmacognostic techniques. Journal of Agricultural and Food Chemistry, 57: 835-1840.
Go to original source...
Go to PubMed... - Mauri P., Pietta P. (2000): Electrospray characterization of selected medicinal plant extracts. Journal of Pharmaceutical and Biomedical Analysis, 23: 61-68.
Go to original source...
Go to PubMed... - Nagoor Meeran M.F., Javed H., Al Taee H., Azimullah S., Ojha S.K. (2017): Pharmacological properties and molecular mechanisms of thymol: Prospects for its therapeutic potential and pharmaceutical development. Frontiers in Pharmacology, 8: 380-414.
Go to original source...
Go to PubMed... - Öztürk M., Temel M., Tinmaz A.B., Kil L. (2012): The position of medicinal and aromatic plants in our foreign trade. In: Medicine and Aromatic Plants Symposium, 13-15 September 2012, Tokat, Turkey: 33-44. (In Turkish)
- Samet H., Cikili Y. (2015): Importance of medicinal and aromatic plants as an alternative crop in the rural development of Turkey. The Journal of Rural and Community Development, 10: 75-84.
- Sana T.R., Roark J.C., Li X., Waddel K.L, Fischer S.M. (2008): Molecular formula and METLIN personal metabolite database matching applied to the identification of compounds generated by LC/TOF-MS. Journal of Biomolecular Techniques, 19: 258-266.
Go to PubMed... - Sancaktaroğlu S., Bayram E. (2011): Research on the determination of the yields and quality characteristics of Istanbul Oregano (Origanum vulgare subsp. hirtum L.) populations of the different origin. Ege Ünivesitesi Ziraat Fakültesi Dergisi (Ege Journal of Agricultural Research), 48: 265-276. (In Turkish)
Go to original source... - Sawada Y., Hirai M.Y. (2013): Integrated LC-MS/MS system for plant metabolomics. Computational and Structural Biotechnology, 4: 1-6.
Go to original source...
Go to PubMed... - Sonibare M.A., Ayoola I.O., Gueye B., Abberton M.T., D'Souza R., Kuhnert N. (2018): Leaves metabolomic profiling of Musa acuminate accessions using UPLC-QTOF- MS/MS and their antioxidant activity. Food Measurement, 12: 1093-1106.
Go to original source... - Tao H.X., Xionga W., Zhao G.D., Penga Y., Zhonga Z.F., Xu L., Duand R., Tsim K.W.K., Yu H., Wanga Y.T. (2018): Discrimination of three Siegesbeckiae Herba species using UPLC-QTOF/MS-based metabolomics approach. Food Chemical Toxicology, 119: 400-406.
Go to original source...
Go to PubMed...
This is an open access article distributed under the terms of the Creative Commons Attribution-NonCommercial 4.0 International (CC BY NC 4.0), which permits non-comercial use, distribution, and reproduction in any medium, provided the original publication is properly cited. No use, distribution or reproduction is permitted which does not comply with these terms.

